Information for 13-GCGGTTGCAA (Motif 11)

A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A
Reverse Opposite:
A C G T C G A T A C T G A G T C G T C A C G T A A G T C T A G C A T C G A G T C
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.851
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets40.0 +/- 18.4bp
Average Position of motif in Background50.8 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCGGTTGCAA
NATGTTGCAA
 A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGGTTGCAA
GGCVGTTR---
 A C G T A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGGTTGCAA-----
NNCGTTGCTATGGNN
 A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCGGTTGCAA-----
NCCGTTGCTANGNGN
 A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTGCAA
TTGCGGTTT---
 A C G T A C G T A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGGTTGCAA
TGGCAGTTGG--
 A C G T A C G T A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGGTTGCAA--
GGGATTGCATNN
 A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGGTTGCAA---
-CTGTTGCTAGGS
 A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A A C G T A C G T A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTGCAA
BRRCVGTTDN--
 A C G T A C G T A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCGGTTGCAA---------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C T G T A G C A T C G A C T G A C G T A C G T A C T G T G A C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A