Information for 14-GGCAGCCACTGTT (Motif 24)

C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A T C A G C G A T A C T G A C T G A G T C A C G T A C T G A G T C G A T C
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 25.7bp
Average Position of motif in Background86.7 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCAGCCACTGTT-
----NCCATTGTTC
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGCAGCCACTGTT
-----CCTTTGTT
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGCAGCCACTGTT--
-----CCATTGTTYB
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGCAGCCACTGTT-
-----CCATTGTTC
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGCAGCCACTGTT-
----NCCATTGTTY
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCCACTGTT
AGGGAAGTCATTTCT
 A C G T A C G T C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGCAGCCACTGTT--
-----CCATTGTTTT
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGCAGCCACTGTT--
-----CCWTTGTYYB
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGCAGCCACTGTT
-----CCWTTGTY
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCAGCCACTGTT
AGGVNCCTTTGT-
 C A T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T