Information for 5-TTTACAAAAGACACTT (Motif 6)

A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T
Reverse Opposite:
G T C A C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T C T A G C G A T C G T A C T G A C G T A
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 14.6bp
Average Position of motif in Background59.1 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTACAAAAGACACTT
GTTAAAAAAAAAAATTA
 A C G T A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTACAAAAGACACTT
TTTGCACACGGCAC--
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTTACAAAAGACACTT
----TCCAATCCACA-
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TTTACAAAAGACACTT--
--------MRSCACTYAA
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTTACAAAAGACACTT------
------TAAGCCACTTGAAATT
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TTTACAAAAGACACTT-
-------AAACCACANN
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TTTACAAAAGACACTT------
------TAAGCCACTTAACATT
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTTACAAAAGACACTT
-----AAAAGTCAA--
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTTACAAAAGACACTT------
------TAAGCCACTTGAATTT
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TTTACAAAAGACACTT--
--------AAGCACTTAA
 A C G T A G C T C G A T C G T A G A T C C G T A G T C A C G T A C G T A C T A G G T C A A G T C C G T A G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A