Information for 2-GNVVCAGSTGBNN (Motif 3)

T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
Reverse Opposite:
G A T C T G C A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A T C G A G C T A G C T A T G C
p-value:1e-44
log p-value:-1.021e+02
Information Content per bp:1.586
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif31.49%
Number of Background Sequences with motif5966.2
Percentage of Background Sequences with motif12.76%
Average Position of motif in Targets50.5 +/- 25.4bp
Average Position of motif in Background50.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
-NNVCAGCTGB--
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
-NAACAGCTGT--
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
---GCAGCTGTNN
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GNVVCAGSTGBNN
NNVVCAGCTGBN-
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
--NNCAGGTGTN-
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
--AACAGGTGNT-
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
--NNCAGGTGCG-
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GNVVCAGSTGBNN
-CAGCAGCTGN--
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GNVVCAGSTGBNN
NGNGACAGCTGCN-
 A C G T T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.90
Offset:2
Orientation:forward strand
Alignment:GNVVCAGSTGBNN
--GACAGCTGCAG
 T A C G T C G A T C G A T A G C A G T C C G T A A T C G T A G C C G A T A C T G A G T C A C G T C A T G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G