Information for 1-NMVCAAACCACAA (Motif 2)

G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A
Reverse Opposite:
G C A T C A G T A C T G A C G T A C T G A C T G A G C T C A G T C A G T A T C G A G C T C A T G C G T A
p-value:1e-55
log p-value:-1.277e+02
Information Content per bp:1.601
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif14.54%
Number of Background Sequences with motif1111.9
Percentage of Background Sequences with motif2.38%
Average Position of motif in Targets48.2 +/- 24.9bp
Average Position of motif in Background50.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.96
Offset:3
Orientation:forward strand
Alignment:NMVCAAACCACAA--
---NWAACCACADNN
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.96
Offset:4
Orientation:forward strand
Alignment:NMVCAAACCACAA-
----AAACCACANN
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.94
Offset:3
Orientation:forward strand
Alignment:NMVCAAACCACAA
---NAAACCACAG
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:NMVCAAACCACAA--
----AAACCACAGAN
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.92
Offset:4
Orientation:reverse strand
Alignment:NMVCAAACCACAA-
----AAACCACAGC
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.86
Offset:4
Orientation:forward strand
Alignment:NMVCAAACCACAA-
----AAACCGCAAA
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.84
Offset:4
Orientation:forward strand
Alignment:NMVCAAACCACAA
----AAACCGCAA
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.77
Offset:5
Orientation:forward strand
Alignment:NMVCAAACCACAA
-----ATCCAC--
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:NMVCAAACCACAA
-TCCAATCCACA-
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:NMVCAAACCACAA-
--SSAATCCACANN
 G C A T G T A C T C G A T A G C G T C A G C T A T C G A G T A C A G T C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C