Information for 5-SHAACTGCMA (Motif 5)

T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
Reverse Opposite:
G C A T C A G T C A T G A G T C T G C A C T A G C G A T A C G T C T A G A T G C
p-value:1e-22
log p-value:-5.254e+01
Information Content per bp:1.594
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif18.49%
Number of Background Sequences with motif3543.9
Percentage of Background Sequences with motif7.64%
Average Position of motif in Targets49.6 +/- 22.6bp
Average Position of motif in Background49.8 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:SHAACTGCMA
NHAACBGYYV
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:SHAACTGCMA
CCAACTGCCA
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:SHAACTGCMA
-YAACBGCC-
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:SHAACTGCMA
--AACCGANA
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:SHAACTGCMA
CCAACTGCCA
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---SHAACTGCMA---
CGACCAACTGCCATGC
 A C G T A C G T A C G T T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---SHAACTGCMA--
CGACCAACTGCCGTG
 A C G T A C G T A C G T T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:SHAACTGCMA
-AAACCGCAA
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-SHAACTGCMA
GCTAATTGCT-
 A C G T T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:SHAACTGCMA--
GAAACTGAAACT
 T A C G G A T C C G T A C G T A G A T C A C G T A C T G G T A C G T C A C G T A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T