Information for 1-DCCACCWGGTGGMASH (Motif 4)

C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
Reverse Opposite:
C T A G A T G C A G C T C A T G G A T C A G T C G T C A A G T C G A T C C G A T C T A G T A C G C G A T A C T G A T C G G A C T
p-value:1e-38
log p-value:-8.851e+01
Information Content per bp:1.588
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.93%
Number of Background Sequences with motif549.2
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets48.5 +/- 26.6bp
Average Position of motif in Background51.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--DCCACCWGGTGGMASH-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--DCCACCWGGTGGMASH--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:DCCACCWGGTGGMASH----
GCCASCAGGGGGCGCYVNNG
 C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:DCCACCWGGTGGMASH
ACCACCTGTT------
 C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-DCCACCWGGTGGMASH
NNVCAGCTGB-------
 A C G T C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-DCCACCWGGTGGMASH
CACCCCCGGGGGGG---
 A C G T C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:DCCACCWGGTGGMASH
---AACAGATGGC---
 C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:DCCACCWGGTGGMASH
------TNNGGGCAG-
 C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:DCCACCWGGTGGMASH
NNCACCTGNN------
 C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:DCCACCWGGTGGMASH
NVCAGCTGBBNN----
 C T G A T A G C G T A C G C T A A T G C G A T C G C T A C T A G T C A G C A G T A C T G C A T G G T A C T C G A T A C G G A T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T