Information for 13-GCGGCAGACT (Motif 14)

A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
Reverse Opposite:
G T C A A C T G A C G T A G T C C G A T A C T G G T A C A G T C A C T G A G T C
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.832
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets64.1 +/- 23.1bp
Average Position of motif in Background45.6 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCGGCAGACT
AGGTGHCAGACA
 A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGGCAGACT
GGCGGGAARN-
 A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGGCAGACT
GGGCGGGAAGG-
 A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCAGACT-
AGGTGNCAGACAG
 A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGGCAGACT
GGCGGGAAAH-
 A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGGCAGACT
GGGCGGGAAGG-
 A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCGGCAGACT-
---BCAGACWA
 A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCGGCAGACT
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCAGACT
TGGCGGGAAAHB
 A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCGGCAGACT
GGGCGGGACC--
 A C G T A C G T A C T G A G T C A C T G A C T G T G A C C G T A A C T G G T C A A G T C A C G T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T