Motif 6

Information for 4-CCSGCCCCGCCCC (Motif 6)

Reverse Opposite:

p-value:	1e-21
log p-value:	-5.020e+01
Information Content per bp:	1.695
Number of Target Sequences with motif	80.0
Percentage of Target Sequences with motif	10.17%
Number of Background Sequences with motif	1309.8
Percentage of Background Sequences with motif	2.80%
Average Position of motif in Targets	52.0 +/- 25.4bp
Average Position of motif in Background	49.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.20
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.90
Offset:	2
Orientation:	forward strand
Alignment:	CCSGCCCCGCCCC- --GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:	2
Score:	0.90
Offset:	1
Orientation:	reverse strand
Alignment:	CCSGCCCCGCCCC-- -NAGCCCCGCCCCCN

KLF5/MA0599.1/Jaspar

Match Rank:	3
Score:	0.89
Offset:	3
Orientation:	forward strand
Alignment:	CCSGCCCCGCCCC ---GCCCCGCCCC

SP1/MA0079.3/Jaspar

Match Rank:	4
Score:	0.89
Offset:	3
Orientation:	forward strand
Alignment:	CCSGCCCCGCCCC- ---GCCCCGCCCCC

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:	5
Score:	0.85
Offset:	1
Orientation:	forward strand
Alignment:	CCSGCCCCGCCCC--- -NRGCCCCRCCCHBNN

SP2/MA0516.1/Jaspar

Match Rank:	6
Score:	0.85
Offset:	3
Orientation:	forward strand
Alignment:	CCSGCCCCGCCCC----- ---GCCCCGCCCCCTCCC

Klf4/MA0039.2/Jaspar

Match Rank:	7
Score:	0.85
Offset:	3
Orientation:	reverse strand
Alignment:	CCSGCCCCGCCCC ---GCCCCACCCA

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	8
Score:	0.84
Offset:	3
Orientation:	reverse strand
Alignment:	CCSGCCCCGCCCC-- ---GCTCCGCCCMCY

PB0039.1_Klf7_1/Jaspar

Match Rank:	9
Score:	0.83
Offset:	0
Orientation:	forward strand
Alignment:	CCSGCCCCGCCCC--- TCGACCCCGCCCCTAT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:	10
Score:	0.82
Offset:	3
Orientation:	reverse strand
Alignment:	CCSGCCCCGCCCC ---GCCMCRCCCH