Information for 5-TGTTGTCAWCAGT (Motif 9)

C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
Reverse Opposite:
C G T A G T A C G C A T T A C G G C T A A G C T C T A G C T G A T G A C C G T A C G T A G A T C C G T A
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.668
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif297.5
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets43.7 +/- 19.8bp
Average Position of motif in Background51.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGTTGTCAWCAGT
--YTGWCADY---
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGTTGTCAWCAGT
-SCTGTCARCACC
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGTTGTCAWCAGT
---TGTCANYT--
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTTGTCAWCAGT
--NTGTCAN----
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGTCAWCAGT
NTTGATTNNATCAN-
 A C G T A C G T C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTTGTCAWCAGT
-VBTGWCAGCB--
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGTTGTCAWCAGT
AAGATGATGTCAT----
 A C G T A C G T A C G T A C G T C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTTGTCAWCAGT
--TTGCCAAG---
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTTGTCAWCAGT
-CCTGTCAA----
 C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGTTGTCAWCAGT
SCHTGTTTACAT----
 A C G T A C G T A C G T C G A T C T A G G C A T A C G T A C T G G A C T G A T C T C G A C G A T A G T C C G T A A C T G G A C T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T A C G T A C G T