Information for 2-TTGGAATTTATTTTTG (Motif 4)

C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A G T C A C G T A C G T A C G A T C G T A C G T A G T C A A G C T C G A T A G T C G T A C C G T A C G T A
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.4 +/- 24.6bp
Average Position of motif in Background67.1 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG----
---GNATTTTTTTTTTGANC
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG----
----NNTTTATTGTTCTNNN
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG----
-----TTCTATTTTTAGNNN
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTGGAATTTATTTTTG----
---GTATCTATTGTTCTTTA
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG----
----AANTTATTGTTCTNNA
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG--
------KCTATTTTTRGH
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG------
TNNANNTCTATTGTTNTNNANN
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG----
---ANNTCTATTGTTCNNNA
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG----
---NNNNTTTTTTTTTNAAC
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGGAATTTATTTTTG---
----NNTTTNTTTTNGNNN
 C G A T A C G T A C T G C T A G C G T A C T G A A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T