Information for 1-TGGTTTTGTTGGT (Motif 1)

A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T
Reverse Opposite:
G C T A G T A C A G T C G T C A C G T A G T A C C G T A C G T A C T G A C G T A G T A C G T A C G T C A
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.797
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif56.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.1 +/- 20.9bp
Average Position of motif in Background57.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTTTGTTGGT--
NNANTTTTATTGGNNN
 A C G T A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT
--NTTTTATTGG-
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T
A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT--
NNNTGTTGTTGTTNG
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT
--TTTTTATTGG-
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T
A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT
--NTTTTATTGG-
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T
A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTTTGTTGGT--
NNAATTTTATTGGNTN
 A C G T A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT----
--NTNTTGTTGTTTGTN
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT----
--GTNTTGTTGTGANNT
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGGTTTTGTTGGT
----ATTGTT---
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGTTTTGTTGGT----
-NNTTTTGTTTTGATNT
 A C G T A C T G A C T G A C G T A G C T C G A T A C G T A C T G A C G T A C G T A C T G A C T G C A G T A C G T A C G T A C G T A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T