Information for 12-AGCCCCTTGCTGC (Motif 21)

C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C
Reverse Opposite:
T C A G A T G C C G T A A C T G A T G C G T C A T C G A T C A G C T A G C A T G A C T G A T G C G A C T
p-value:1e-7
log p-value:-1.702e+01
Information Content per bp:1.726
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif106.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets53.1 +/- 25.6bp
Average Position of motif in Background51.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGCCCCTTGCTGC-
--CCCCCTGCTGTG
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCCCCTTGCTGC--
GGCCYCCTGCTGDGH
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGCCCCTTGCTGC
---CACTTCCTGT
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCCCCTTGCTGC-
GACCCCCCGCTGTG
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCCCCTTGCTGC----
--TCNCCTGCTGNGNNN
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCCCCTTGCTGC
-ACCACATCCTGT
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCCCCTTGCTGC--
GACCCCCCGCTGCGC
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCCCCTTGCTGC----
--TNTCCTGCTGTGNNG
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGCCCCTTGCTGC-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGCCCCTTGCTGC
---CACTTCCTGT
 C T G A A T C G A G T C G T A C A G T C A G T C A G C T A C G T T A C G A G T C C G A T A T C G A G T C
A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T