Information for 7-RAMTAGSGGGCGC (Motif 13)

C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C A G T C A G T C A T C G A G T C A C G T C T G A A C G T A C G T A G C T
p-value:1e-9
log p-value:-2.197e+01
Information Content per bp:1.886
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 29.0bp
Average Position of motif in Background47.3 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:RAMTAGSGGGCGC----
NNNAAGGGGGCGGGNNN
 C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---RAMTAGSGGGCGC-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--RAMTAGSGGGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----RAMTAGSGGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RAMTAGSGGGCGC---
-ATAAGGGCGCGCGAT
 C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T
A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RAMTAGSGGGCGC------
---TTGGGGGCGCCCCTAG
 C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RAMTAGSGGGCGC---
-ATAAAGGCGCGCGAT
 C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T
A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----RAMTAGSGGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RAMTAGSGGGCGC------
---TGGCGCGCGCGCCTGA
 C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

KLF14/MA0740.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RAMTAGSGGGCGC----
---AAGGGGGCGTGGCC
 C T G A C G T A T G A C A G C T G T C A A C T G A T G C A C T G A C T G A C T G G T A C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C