Information for 3-GGTCTAVTTTGTTCTT (Motif 7)

A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
Reverse Opposite:
C G T A C G T A A C T G C T G A C G T A A T G C T C G A G T C A C G T A A C G T A C G T C T G A T A C G G T C A A T G C A T G C
p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.734
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.4 +/- 12.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0131.1_Pax4/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTAVTTTGTTCTT
NNGNGCTAATTAGNTNA-
 A C G T A C G T A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTCTAVTTTGTTCTT
GNNTTAATTGGTTGTT
 A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGTCTAVTTTGTTCTT-
-----CCTTTGATCTTT
 A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PH0031.1_Evx1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTAVTTTGTTCTT
NNNCACTAATTAGTNNT-
 A C G T A C G T A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGTCTAVTTTGTTCTT-
--AACCCTTTGATCTTT
 A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T A C G T
A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTAVTTTGTTCTT
ANCGCTAATTGGTCTNN
 A C G T A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0156.1_Rax/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTAVTTTGTTCTT
NNGCGCTAATTAGTGCA-
 A C G T A C G T A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
C T A G A C G T A T C G T A G C C T A G A G T C G A C T T C G A C T G A A G C T A C G T C T G A T C A G A G C T T A C G A T G C G C T A A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGTCTAVTTTGTTCTT
--NNTAATTANN----
 A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GGTCTAVTTTGTTCTT
--------GTGACCTT
 A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PAX4/MA0068.2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGTCTAVTTTGTTCTT
---CTAATTAG-----
 A T C G A T C G A C G T A T G C A G C T C G T A T C G A A C G T A C G T A G C T T A C G C G A T G A C T A G T C A C G T G C A T
A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T A C G T A C G T A C G T