Information for 3-CTGCAAATTTTGT (Motif 6)

G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C T G A T G C C G T A A C T G
p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 31.6bp
Average Position of motif in Background82.6 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAATTTTGT
CCTTGCAATTTTTNN
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAATTTTGT
TTATGCAAAT-----
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGCAAATTTTGT
ATATGCAAAT-----
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAAATTTTGT
ATATGCAAATNNN--
 A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGCAAATTTTGT
ATTATGCTAATTT---
 A C G T A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTGCAAATTTTGT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTGCAAATTTTGT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTGCAAATTTTGT
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGCAAATTTTGT----
---CTAATATTGCTAAA
 G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGCAAATTTTGT----
---CTAATATTGCTAAA
 G T A C A C G T A T C G G T A C C G T A C G T A C G T A A C G T C G A T A C G T A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A