Information for 1-TCAGCCTTAGCAGNCT (Motif 3)

C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
Reverse Opposite:
C G T A T A C G C T G A G A T C A C G T A C T G A G T C C A G T T C G A C G T A C T A G A C T G A G T C A C G T A C T G C G T A
p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.736
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.5 +/- 19.5bp
Average Position of motif in Background17.6 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGCCTTAGCAGNCT
-CAGCC----------
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCCTTAGCAGNCT
GTCAGCANNTN------
 A C G T C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCCTTAGCAGNCT
TGAGTCAGCA----------
 A C G T A C G T A C G T A C G T C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCAGCCTTAGCAGNCT
-AAGCTTG--------
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TCAGCCTTAGCAGNCT
--NGCCTNAGGCN---
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCAGCCTTAGCAGNCT
TCAGTCTT--------
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCTTAGCAGNCT
NGTCAGCANTTT------
 A C G T A C G T C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCAGCCTTAGCAGNCT
-GAGSCCGAGC-----
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCAGCCTTAGCAGNCT
--TGCCTGAGGCN---
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCAGCCTTAGCAGNCT-
--TGCCTGCGYCMCCTT
 C G A T G T A C C G T A C T A G A G T C G A T C A C G T A G C T G T C A C T A G A G T C T C G A C A T G A G C T A T G C A C G T A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T