Information for 11-GAGTGTTACAGCT (Motif 25)

T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
Reverse Opposite:
C T G A C T A G G T A C A G C T A T C G G C A T C T G A C G T A A G T C C G T A A G T C C G A T A T G C
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.696
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif68.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.8 +/- 30.9bp
Average Position of motif in Background50.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGTGTTACAGCT
-AGGGTAACAGC-
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGTGTTACAGCT
-ATTGTTA-----
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGTGTTACAGCT----
GATATTGACAGCTGCGT
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTTACAGCT
TTRAGTGSYK-----
 A C G T A C G T T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGTTACAGCT
CTYRAGTGSY------
 A C G T A C G T A C G T T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGTGTTACAGCT
-ATTGTT------
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTTACAGCT
TTGAGTGSTT-----
 A C G T A C G T T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGTGTTACAGCT----
TCNNTTTACAGCGNNNT
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGTGTTACAGCT----
TCNNTTTACAGCGNNNT
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GAGTGTTACAGCT----
-------HCAGCTGDTN
 T A C G C G T A T C A G C G A T T A C G A C G T A G C T C G T A A T G C C T G A A C T G G A T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T