Information for 10-TCCTTGCRARACCTGC (Motif 22)

G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A C T A G A T C G A G C T G A T C G A C T G A C T T C A G A G T C G T C A C G T A A C T G T A C G C G T A
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif39.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.3 +/- 19.0bp
Average Position of motif in Background45.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGCRARACCTGC
TGWCCTCARNTGACC---
 A C G T A C G T G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TCCTTGCRARACCTGC-
--------NCACCTGTN
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCCTTGCRARACCTGC--
------SNGCACCTGCHS
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCCTTGCRARACCTGC
BNTGDCCTTG----------
 A C G T A C G T A C G T A C G T G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TCCTTGCRARACCTGC
------RYHYACCTGB
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TCCTTGCRARACCTGC-
-------NNCACCTGNN
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TCCTTGCRARACCTGC-
-------AACACCTGCT
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TCCTTGCRARACCTGC-
-------TACACCTGTC
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCCTTGCRARACCTGC
TGACCTTTCGTGACCTT-
 A C G T A C G T G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TCCTTGCRARACCTGC-
-------CGCACCTGCT
 G C A T A T G C A G T C A C G T A C G T T A C G A G T C C T G A C G T A C T A G C T G A T A G C A G T C C G A T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T