Information for 7-MAAAGGGGCASCA (Motif 17)

G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.341e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 14.1bp
Average Position of motif in Background82.9 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MAAAGGGGCASCA--
NNNNTTGGGCACNNCN
 A C G T G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-MAAAGGGGCASCA
AAAAAGAGGAAGTA
 A C G T G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

SPI1/MA0080.4/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MAAAGGGGCASCA
AAAAAGCGGAAGTA
 A C G T G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:MAAAGGGGCASCA-----
-AATGGGGTATCACGTTT
 G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:MAAAGGGGCASCA
--NGTGGGCAT--
 G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MAAAGGGGCASCA-----
-AATAGGGTATCATATAT
 G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MAAAGGGGCASCA----
-AAAATGGCGCCATTTT
 G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MAAAGGGGCASCA-----
AAAAATGGCGCCATTTTT
 G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----MAAAGGGGCASCA
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MAAAGGGGCASCA-----
-GATAGGGTATCACTAAT
 G T A C C G T A G T C A C G T A A C T G A C T G A C T G A C T G A G T C C G T A A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T