Information for 4-BTTCACTWAGTGA (Motif 14)

A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A
Reverse Opposite:
A C G T G T A C C G T A A T G C C A G T G C T A C G T A A T C G C G A T T A C G T C G A C T G A T C G A
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.688
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif108.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets52.2 +/- 24.3bp
Average Position of motif in Background49.0 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:BTTCACTWAGTGA-
-----TTAAGTGGN
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:BTTCACTWAGTGA
-----TTAAGTGC
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:BTTCACTWAGTGA
-----CTAATKGV
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:BTTCACTWAGTGA-
-----TTAAGTGGT
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:BTTCACTWAGTGA--
-----TTRAGTGSYK
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:BTTCACTWAGTGA-----
-NTNNTTAAGTGGTTANN
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:BTTCACTWAGTGA--
-----TTAAGTGCTT
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0197.1_Zfp105_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:BTTCACTWAGTGA-----
-NAAANTTATTGAANCAN
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:BTTCACTWAGTGA---
----GGTTAGAGACCT
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:BTTCACTWAGTGA-----
-NTNNTTAAGTGGNTNAN
 A C G T A G C T A G C T A T G C G C T A A T G C C G A T C G A T G T C A A T C G C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G