Information for 8-ATGTACATGACAGATT (Motif 12)

G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
Reverse Opposite:
G T C A G C T A C A G T G A T C C G A T A C T G G C A T T G A C T G C A A C G T A C T G G A C T C G T A T G A C C G T A C A G T
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.644
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif68.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets56.9 +/- 24.3bp
Average Position of motif in Background44.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGTACATGACAGATT
ATTTGCATAACAAAG-
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGTACATGACAGATT
ATTTGCATAACAATG-
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGTACATGACAGATT
AAAATACATGTAAAAAT
 A C G T G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:ATGTACATGACAGATT
------TTGACAG---
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATGTACATGACAGATT
------TTGACAGC--
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ATGTACATGACAGATT
------TTGACAGG--
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGTACATGACAGATT
TAAATACATGTAAAATT
 A C G T G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:ATGTACATGACAGATT
-------TGTCANYT-
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ATGTACATGACAGATT
-----CATGAC-----
 G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATGTACATGACAGATT
TTCATTTGCATAT------
 A C G T A C G T A C G T G C T A C G A T A C T G A C G T C T G A T A G C G T C A A C G T A C T G C G T A G T A C C G T A C T A G G T C A C G A T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T