Information for 9-ATCTTAATGC (Motif 24)

C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T C G T A C G T A T A C G C G T A A G C T
p-value:1e-5
log p-value:-1.351e+01
Information Content per bp:1.950
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.9 +/- 32.0bp
Average Position of motif in Background46.9 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATCTTAATGC-
ATATTAATTAA
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATCTTAATGC--
--CCTAATCCGC
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATCTTAATGC-
---TTAATCCT
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATCTTAATGC
--GKTAATGR
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATCTTAATGC-
---TTAATCCC
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATCTTAATGC--
--GCTAATCCCC
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATCTTAATGC-
--CTTAATCCC
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCTTAATGC
--TTTAAT--
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATCTTAATGC-
---TTAATTAN
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATCTTAATGC--
--NYTAATCCYB
 C T G A A C G T A T G C C G A T A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T