Information for 10-AABAKAARTA (Motif 20)

C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T G T A C A G C T T G C A A C G T C G A T
p-value:1e-8
log p-value:-1.900e+01
Information Content per bp:1.797
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif62.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets39.9 +/- 27.3bp
Average Position of motif in Background51.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC1/MA0032.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AABAKAARTA-
TATGTAAATAT
 C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AABAKAARTA--
DCYAAAAATAGM
 C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AABAKAARTA-
TATGTAAATAT
 C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AABAKAARTA
TAATTTAATTA
 A C G T C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AABAKAARTA
TAATTTAATTA
 A C G T C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AABAKAARTA
TAATTTAATTA
 A C G T C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AABAKAARTA
-AAATAAACA
 C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AABAKAARTA--
TAAGTAAACAAA
 C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AABAKAARTA-----
TAAATGTAAACAAAGGT
 A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AABAKAARTA---
ATGCTAAAAATAGAA
 A C G T A C G T C G T A C G T A A C G T C T G A A C T G C G T A G T C A C T A G A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A