Information for 6-GGGGCTCMGSCTGGKG (Motif 13)

A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
Reverse Opposite:
A T G C G T C A A G T C A G T C C G T A A C T G T A C G A T G C A C G T A C T G C G T A A C T G A G T C A G T C A T G C A G T C
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.848
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.1 +/- 27.2bp
Average Position of motif in Background59.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGGGCTCMGSCTGGKG
---GCTCCG-------
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGGGCTCMGSCTGGKG
---GCTCGGSCTC---
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGGCTCMGSCTGGKG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGGCTCMGSCTGGKG
-GGCCYCCTGCTGDGH
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGGCTCMGSCTGGKG----
-TAGCGCCCCCTGGTGGCCA
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GGGGCTCMGSCTGGKG
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGGGCTCMGSCTGGKG
--NGCTN---------
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGGGCTCMGSCTGGKG----
GGAGCTGTCCATGGTGCTGA
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCTCMGSCTGGKG
NNNGGGGCGCCCCCNN---
 A C G T A C G T A C G T A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGGGCTCMGSCTGGKG--
---TCNCCTGCTGNGNNN
 A C T G A T C G C T A G A C T G A G T C A C G T A G T C G T C A A T C G A T C G A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G