Information for 9-AWAGGGBNWGABCTTT (Motif 9)

C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
Reverse Opposite:
G T C A T C G A G C T A C A T G T A C G A G C T A G T C C G A T A T C G T C G A G A T C A G T C G T A C C A G T C G A T G A C T
p-value:1e-13
log p-value:-3.028e+01
Information Content per bp:1.561
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif228.1
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets59.0 +/- 24.8bp
Average Position of motif in Background47.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:AWAGGGBNWGABCTTT----
--------TGACCTTTNCNT
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AWAGGGBNWGABCTTT----
----NNNNTGACCTTTNNNN
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AWAGGGBNWGABCTTT----
----NNNGTGACCTTTGNNN
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AWAGGGBNWGABCTTT
--ATGGGGTGAT----
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AWAGGGBNWGABCTTT
--ATGGGGTGAT----
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AWAGGGBNWGABCTTT
GAAAAGGTGTGAAAATT
 A C G T C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AWAGGGBNWGABCTTT
--GTGGCGTGACNG--
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AWAGGGBNWGABCTTT
GATAGGGTATCACTAAT
 A C G T C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AWAGGGBNWGABCTTT
GATAGGGTATCACTAAT
 A C G T C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AWAGGGBNWGABCTTT-
-------CTGACCTTTG
 C T G A G C T A G T C A C A T G C T A G C T A G A G C T T A G C C G T A C T A G C T G A A T C G G T A C C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G