Information for 11-ATGACCCTTCTGA (Motif 7)

C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G C T G A C T G A A C T G A C T G A C T G C G A T A T G C C G T A A G C T
p-value:1e-14
log p-value:-3.294e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 21.4bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGACCCTTCTGA
-TGACCYCT----
 C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCCTTCTGA
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGACCCTTCTGA-
--CCCCCTGCTGTG
 C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGACCCTTCTGA
-TGACCT------
 C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGACCCTTCTGA
AAGACCCYYN---
 C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ATGACCCTTCTGA--
-----CCTGCTGAGH
 C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATGACCCTTCTGA-----
NNNTGAACTCNNTGACCTCN
 A C G T A C G T C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCCTTCTGA
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATGACCCTTCTGA
CNNTTGACCTTTG---
 A C G T A C G T A C G T C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGACCCTTCTGA-
TATCGACCCCCCACAG
 A C G T A C G T C T G A A C G T A T C G C G T A A G T C A G T C A G T C A G C T A G C T A G T C A C G T A C T G C T G A A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G