Information for 5-KYACARWGRWACTTGT (Motif 5)

C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
Reverse Opposite:
C G T A G T A C C T G A T C G A C T A G C A G T C G T A A G T C G T A C C G T A A G C T C G A T A C T G A C G T C T A G G T C A
p-value:1e-16
log p-value:-3.784e+01
Information Content per bp:1.624
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif101.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets44.8 +/- 19.6bp
Average Position of motif in Background49.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:KYACARWGRWACTTGT
--ACAAAGGNBCCT--
 C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-KYACARWGRWACTTGT
VRRACAAWGG-------
 A C G T C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KYACARWGRWACTTGT
--ACAAAG--------
 C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:KYACARWGRWACTTGT
-AACAAAGG-------
 C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---KYACARWGRWACTTGT
AATGAACAATGGAATT---
 A C G T A C G T A C G T C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KYACARWGRWACTTGT
-RACAAWGG-------
 C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-KYACARWGRWACTTGT
RNAACAATGG-------
 A C G T C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-KYACARWGRWACTTGT
VRAACAATGG-------
 A C G T C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:KYACARWGRWACTTGT
RAACAATGGN------
 C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KYACARWGRWACTTGT
GGAACAAAGR-------
 A C G T C A G T G A T C G T C A G T A C C G T A C T G A G C A T A C T G T C A G C G A T G T C A G A T C A G C T A G C T C A T G G C A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T