Information for 24-ATRTGTGACACTGTRT (Motif 34)

C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
Reverse Opposite:
C T G A A G C T C G T A A G T C C G T A A C T G A C G T T A C G C G A T A G T C C G T A A G T C C G T A G A C T C T G A A G C T
p-value:1e-4
log p-value:-1.020e+01
Information Content per bp:1.807
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.6 +/- 25.2bp
Average Position of motif in Background52.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT-
ATAAATGACACCTATCA
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
----TTGACAG-----
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATRTGTGACACTGTRT
--ARNTGACA------
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
AGGTGTGAAM------
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
AGGTGTGA--------
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
AGGTGTGA--------
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
AGGTGTGAAA------
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
----TTGACAGG----
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATRTGTGACACTGTRT
AAGGTGTGAAAAT----
 A C G T C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATRTGTGACACTGTRT
AGGTGTGA--------
 C T G A G A C T C T G A A C G T C T A G A C G T A C T G G C T A A T G C G T C A G T A C A C G T C T A G C G A T C T G A A G C T
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T