Information for 23-AGAGGGGAGCTGGCCT (Motif 29)

C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G G T A C A T G C C G T A A C T G A G T C A C G T A G T C A G T C A G T C A G T C A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 25.0bp
Average Position of motif in Background64.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAGGGGAGCTGGCCT
----CGGAGC------
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGAGGGGAGCTGGCCT
--TGGGGA--------
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AGAGGGGAGCTGGCCT
TGCGCATAGGGGAGGAG----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGGGAGCTGGCCT
AAAGRGGAAGTG----
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGAGGGGAGCTGGCCT
--VNAVCAGCTGGC--
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGGGAGCTGGCCT
NNNNGGGGGAAGANGG---
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:AGAGGGGAGCTGGCCT--
----------TGACCTYA
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGAGGGGAGCTGGCCT-
NAAGGGGGCGTGGCTTN
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGAGGGGAGCTGGCCT
-NGNGACAGCTGCN--
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGAGGGGAGCTGGCCT
AAGGKGRCGCAGGCA-
 C G T A A C T G C G T A A C T G A C T G C T A G T C A G G T C A A C T G G T A C A C G T A T C G A C T G A G T C A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T