Information for 20-CACATACTAAVTACCC (Motif 25)

G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
Reverse Opposite:
C T A G A C T G C T A G C G A T C T G A A C T G A C G T A C G T C G T A A C T G A G C T C G T A A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.775
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 23.5bp
Average Position of motif in Background72.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACATACTAAVTACCC
SNGCACCTGCHS-------
 A C G T A C G T A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACATACTAAVTACCC
ACCACATCCTGT------
 A C G T A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACATACTAAVTACCC
NCACCTGTN--------
 A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACATACTAAVTACCC
CACATTCCAT------
 G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACATACTAAVTACCC
CACATTCCAT------
 G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CACATACTAAVTACCC
GATAACATCCTAGTAG---
 A C G T A C G T A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CACATACTAAVTACCC
CACGTGNT--------
 G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACATACTAAVTACCC
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACATACTAAVTACCC
NNCACCTGNN--------
 A C G T A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACATACTAAVTACCC
AACACCTGCT--------
 A C G T A C G T G T A C C G T A A G T C G T C A A C G T C T G A A G T C A C G T G T C A G T C A T A G C A G C T C G T A A G T C A G T C G A T C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T