Information for 18-AGAACAGTCATCCAGA (Motif 23)

G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
Reverse Opposite:
C G A T G T A C A G C T C A T G C T A G C G T A C G A T T A C G T C G A A T G C C G A T A C T G C G A T A G C T A G T C C A G T
p-value:1e-10
log p-value:-2.319e+01
Information Content per bp:1.669
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif68.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.0 +/- 24.9bp
Average Position of motif in Background53.3 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAACAGTCATCCAGA--
--NNCATTCATTCATNNN
 G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A A C G T A C G T
A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAGTCATCCAGA
NTTNAGAACAATTA------
 A C G T A C G T A C G T A C G T G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AGAACAGTCATCCAGA--
--------ATGCCAGACN
 G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGTCATCCAGA
TTAAGAACAATAAATT---
 A C G T A C G T A C G T G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAACAGTCATCCAGA
-GATGAGTCATN----
 G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAACAGTCATCCAGA
-GATGAGTCATCC---
 G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAACAGTCATCCAGA
GAAGATCAATCACTTA--
 A C G T A C G T G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGAACAGTCATCCAGA--
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A A C G T A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGAACAGTCATCCAGA-----
---WNAGTCADAVTGAAACTN
 G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGAACAGTCATCCAGA
CCAGGAACAG---------
 A C G T A C G T A C G T G C T A C T A G T C G A C G T A G T A C C G T A T A C G A C G T A G T C C G T A G A C T G A T C G A T C C T G A A C T G G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T