Information for 14-RAGAWMAAARGYTRGG (Motif 17)

C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
Reverse Opposite:
A G T C A T G C A G C T G T C A C T G A A G T C A G T C A C G T A C G T A G C T A C T G C G A T A C G T A G T C C G A T A G T C
p-value:1e-11
log p-value:-2.568e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 18.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-RAGAWMAAARGYTRGG
AAAGATCAAAGGGTT--
 A C G T C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-RAGAWMAAARGYTRGG
AAAGATCAAAGG-----
 A C G T C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RAGAWMAAARGYTRGG
NANAGATCAAAGGGNNN-
 A C G T A C G T C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RAGAWMAAARGYTRGG
-AAAACAAAGG-----
 C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RAGAWMAAARGYTRGG
-ACATCAAAGGNA---
 C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-RAGAWMAAARGYTRGG
AAAGATCAAAGGAA---
 A C G T C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RAGAWMAAARGYTRGG
NNNAGATCAAAGGANNN-
 A C G T A C G T C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RAGAWMAAARGYTRGG
-ACWTCAAAGG-----
 C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RAGAWMAAARGYTRGG
ATAAGAACAAAGGACTA-
 A C G T A C G T C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RAGAWMAAARGYTRGG
-ACATCAAAGG-----
 C T A G C G T A A C T G C G T A C G T A G T A C C T G A C G T A C G T A C T A G A C T G A G C T A C G T C T G A A T C G A C T G
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T