Information for 12-TTGGATGACTAATGGA (Motif 13)

A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C G T A C G T C A A C G T A C G T C G T A A T C G A C G T A G T C C G T A A C G T A G T C G T A C G T C A C G T A
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 28.4bp
Average Position of motif in Background25.2 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGGATGACTAATGGA
-ACCGTGACTAATTNN
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTGGATGACTAATGGA
-----TGATTGATGA-
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

JUNB/MA0490.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGGATGACTAATGGA
--GGATGACTCAT---
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGGATGACTAATGGA
--GGATGACTCATC--
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGGATGACTAATGGA
--GGATGACTCAT---
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTGGATGACTAATGGA
---DATGASTCATNN-
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T A C G T C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C A C G T

JDP2/MA0655.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTGGATGACTAATGGA
----ATGACTCAT---
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTGGATGACTAATGGA
---GATGAGTCATN--
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGGATGACTAATGGA
---RATGASTCAT---
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A
A C G T A C G T A C G T C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTGGATGACTAATGGA-
-----TGATTRATGGCY
 A C G T A C G T A C T G A C T G T G C A A C G T A C T G C G T A A T G C C G A T C G T A C G T A A C G T A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C