Information for 11-VHTCTTGACCCCATTT (Motif 11)

T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T
Reverse Opposite:
C G T A G T C A G T C A A G C T C T A G A C T G A C T G C T A G A C G T T G A C C G T A C T G A A C T G C G T A C A G T A G C T
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.779
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 29.1bp
Average Position of motif in Background68.0 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:VHTCTTGACCCCATTT-
TGTCGTGACCCCTTAAT
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT-
NNANTTGACCCCTNNNN
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT-
-NNCNTGACCCCGCTCT
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT-
NNNNTTGACCCCTNNNN
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT
-----TGACCYCT---
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT
----ATCACCCCAT--
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:VHTCTTGACCCCATTT
----ATCACCCCAC--
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:VHTCTTGACCCCATTT
----ATCACCCCAT--
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT-
-NNNNTGACCCGGCGCG
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:VHTCTTGACCCCATTT
-----TGACCT-----
 T C G A G T C A C G A T G T A C G A C T A C G T A C T G C G T A A G T C A G T C G T A C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T