Information for 1-TGACCTTTGHCCY (Motif 1)

C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C
Reverse Opposite:
C T A G C T A G C T A G C A G T T A G C C T G A T C G A C T G A C T A G C A T G A C G T A T G C G T C A
p-value:1e-87
log p-value:-2.024e+02
Information Content per bp:1.611
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif23.92%
Number of Background Sequences with motif1649.3
Percentage of Background Sequences with motif3.53%
Average Position of motif in Targets51.7 +/- 23.4bp
Average Position of motif in Background50.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY--
TGACCTTTGCCCTAN
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGCCCCA
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGCCCTA
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGACCTC
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGACCTN
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY--
TGACCTCTGACCCCN
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGACCCC
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGACCCC
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGHCCY-
TGACCTTTGACCCC
 C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTTGHCCY
CTGACCTTTG----
 A C G T C A G T T A C G T G C A G T A C G A T C A G C T A G C T G A C T A T C G G T C A G A T C G A T C G A T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T