Information for 1-CACGGGGACG (Motif 3)

G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
Reverse Opposite:
A T G C A C T G A C G T A T G C A G T C A G T C G T A C A T C G A C G T C T A G
p-value:1e-12
log p-value:-2.776e+01
Information Content per bp:1.660
Number of Target Sequences with motif244.0
Percentage of Target Sequences with motif25.13%
Number of Background Sequences with motif7872.3
Percentage of Background Sequences with motif16.22%
Average Position of motif in Targets48.2 +/- 26.1bp
Average Position of motif in Background50.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CACGGGGACG
--TGGGGA--
 G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACGGGGACG
GGCACGTGCC--
 A C G T A C G T G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CACGGGGACG
CACGTGGN--
 G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACGGGGACG---
-NCGCGGACGTTG
 G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G A C G T A C G T A C G T
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACGGGGACG
GGTCACGTGG---
 A C G T A C G T A C G T G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACGGGGACG
NNCCACGTGG---
 A C G T A C G T A C G T G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACGGGGACG
CACGTGGC--
 G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:8
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------CACGGGGACG-----
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACGGGGACG
ACACGTGC---
 A C G T G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACGGGGACG
CCACGTGGNN-
 A C G T G A T C T G C A A T G C C A T G T C A G C T A G T A C G T G C A T G A C A T C G
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T