Information for 4-ACAATAAGCT (Motif 10)

C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
Reverse Opposite:
G C T A A C T G A G T C A C G T A G C T T G C A A C G T A C G T A C T G A G C T
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.675
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif240.6
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets54.8 +/- 26.6bp
Average Position of motif in Background49.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------ACAATAAGCT
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAATAAGCT
GACAATGNN--
 A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ACAATAAGCT-
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------ACAATAAGCT
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ACAATAAGCT
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATAAGCT
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAATAAGCT
AACAAT-----
 A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ACAATAAGCT--
-----AAGCTTG
 C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------ACAATAAGCT----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATAAGCT
NTTNAGAACAATTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T A C G T C A T G C A A C G T T C G A T C G A T C A G G T A C C G A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T