Information for 5-CTCCGGCGCCCGG (Motif 9)

A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
Reverse Opposite:
A T G C A T G C T C A G A T C G C T A G A T G C T A C G A T G C T A G C A T C G T A C G T C G A A C T G
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.747
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif635.0
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets42.7 +/- 23.3bp
Average Position of motif in Background49.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGCGCCCGG--
TTGGGGGCGCCCCTAG
 A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGCGCCCGG
GCTCCGCCCMCY--
 A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCCGGCGCCCGG
--AGCGCGCC---
 A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCCGGCGCCCGG-
CCCCCGCCCCCGCC
 A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGCGCCCGG
GCTCCG--------
 A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGCGCCCGG---
AGCTCGGCGCCAAAAGC
 A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGCGCCCGG
GGTCCCGCCC----
 A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCCGGCGCCCGG---
--TCCGCCCCCGCATT
 A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G A C G T A C G T A C G T
A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCCGGCGCCCGG
GGCCCCGCCCCC---
 A C G T A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTCCGGCGCCCGG
GCCCCGCCCCC---
 A C G T A G T C A G C T A T G C A T G C A T C G A T C G A T G C T A C G A G T C A T G C A G T C T A C G A T C G
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T