Information for 2-CGTCTCCCTCGGG (Motif 4)

A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G
Reverse Opposite:
A T G C G T A C A T G C T A C G T G C A C T A G A T C G A T C G C T G A A C T G T C G A A T G C A T C G
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.777
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif98.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets54.4 +/- 22.2bp
Average Position of motif in Background45.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGTCTCCCTCGGG-
--NGTCCCNNGGGA
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTCTCCCTCGGG---
--ANTCCCTNGGGAAT
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTCTCCCTCGGG----
--ATTCCCTGAGGGGAA
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTCTCCCTCGGG
-NYTTCCCGCC--
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G
A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTCTCCCTCGGG----
--ACCCCCCCGGGGGGN
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGTCTCCCTCGGG----
--ATTGCCTGAGGCGAA
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTCTCCCTCGGG----
--NCCCCCCCGGGGGGN
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGTCTCCCTCGGG----
---CCCCCCCGGGGGNN
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGTCTCCCTCGGG----
-----SCCTSAGGSCAW
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGTCTCCCTCGGG-
--GTCCCCAGGGGA
 A T G C T A C G A C G T A G T C A G C T A T G C A T G C A G T C A C G T A G T C T A C G A C T G T A C G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A