Information for 2-CAGGGCCCCGTGCACT (Motif 3)

A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C T G A C T G A C T G A T C G A G T C A T G C A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.4 +/- 10.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGGGCCCCGTGCACT
--GTGCCGTGTGCAAA
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
---GGCCCCGCCCCC-
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
----GACACGTGCC--
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
----GCCACGTG----
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT-----
----TACATGTGCACATAAAA
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
----GACACGTGCC--
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
----NCCACGTG----
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT--
--GGGCCGTGTGCAAAAA
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T A C G T A C G T
A C G T A C G T C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
---NNCCACGTGG---
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CAGGGCCCCGTGCACT
---NNCCACGTGG---
 A G T C G T C A A C T G A T C G A C T G A T G C A G T C A G T C G T A C A C T G A C G T C T A G A G T C G T C A A G T C C G A T
A C G T A C G T A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T