Information for 7-CGRGTCTCAACCCCGC (Motif 12)

A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C T G C G T A A C T G C G T A A T G C A G C T A T G C A C T G
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.5 +/- 17.7bp
Average Position of motif in Background42.9 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC------
------TCGACCCCGCCCCTAT
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC-------
------TACGCCCCGCCACTCTG
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC
-AGGTCTCTAACC---
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGRGTCTCAACCCCGC---
---NNCNTGACCCCGCTCT
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC------
------CTATCCCCGCCCTATT
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC----
----TATCGACCCCCCACAG
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CGRGTCTCAACCCCGC---
----TCCCAGMCRAGCCCC
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CGRGTCTCAACCCCGC-----
-------NAGCCCCGCCCCCN
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC-
--NRGCCCCRCCCHBNN
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CGRGTCTCAACCCCGC
----GCCCCGCCCC--
 A G T C A T C G C T A G A T C G A C G T A G T C A C G T A G T C G T C A C G T A A G T C A G T C A G T C G T A C A C T G A G T C
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T