Information for 1-AAGACGGAGC (Motif 10)

T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A T G C G T A C A T C G A C G T A G T C A C G T A G C T
p-value:1e-8
log p-value:-1.920e+01
Information Content per bp:1.856
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif175.0
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets43.8 +/- 24.4bp
Average Position of motif in Background48.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:AAGACGGAGC
----CGGAGC
 T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGACGGAGC
GAGSCCGAGC
 T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGACGGAGC
CCAGACAG---
 A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGACGGAGC
CCAGACRSVB-
 A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGACGGAGC
RGKGGGCGGAGC
 A C G T A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGACGGAGC-
GRTGMTRGAGCC
 A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGACGGAGC-
CAAGATGGCGGC
 A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGACGGAGC-
GGGGGCGGGGCC
 A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGACGGAGC--
ATGACTCAGCAD
 T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C A C G T A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGACGGAGC---
TNAACGACGTCGNCCA
 A C G T A C G T A C G T T C G A C G T A A C T G G T C A A T G C A C T G A T C G T C G A A C T G A T G C A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A