Information for 2-CGGTCAGGAC (Motif 9)

G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C
Reverse Opposite:
A C T G A C G T A T G C A T G C C G A T A C T G T G C A A T G C A G T C A C T G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.683
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif4.98%
Number of Background Sequences with motif914.9
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets46.1 +/- 26.7bp
Average Position of motif in Background50.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGTCAGGAC
CTGTCTGG--
 G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCAGGAC
TGAGTCAGCA-
 A C G T G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGGTCAGGAC---
--GTCAGCANNTN
 G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T A C G T A C G T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGTCAGGAC-
-GGGCGGGACC
 G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGGTCAGGAC---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGTCAGGAC----
--NDCAGGAARTNN
 G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGTCAGGAC-
-GGTCTGGCAT
 G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGTCAGGAC
VBSYGTCTGG--
 A C G T A C G T G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGGTCAGGAC----
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGTCAGGAC---
-NGTCAGCANTTT
 G T A C T C A G T A C G A C G T T G A C G C T A A T C G A T C G T G C A T G A C A C G T A C G T A C G T
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T