Information for 11-GTCCCAGACCGVG (Motif 13)

A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
Reverse Opposite:
A G T C A C G T A G T C A C T G A C T G A G C T A G T C A C G T A T C G A C T G A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.4 +/- 24.0bp
Average Position of motif in Background55.1 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GTCCCAGACCGVG
---CCAGACAG--
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCCCAGACCGVG
ATGCCAGACN---
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCAGACCGVG
AGGTGNCAGACAG--
 A C G T A C G T A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCCCAGACCGVG
AGGTGHCAGACA---
 A C G T A C G T A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTCCCAGACCGVG-----
----CAGGCCNNGGCCNN
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTCCCAGACCGVG
---CTAGGCCT--
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTCCCAGACCGVG
---CCAGACRSVB
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTCCCAGACCGVG
BCNGGTTCTAGANCN--
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTCCCAGACCGVG-
----GAGSCCGAGC
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCCCAGACCGVG---
-TCCCAGMCRAGCCCC
 A C T G A C G T A G T C A G T C A T G C C G T A A C T G C T G A G T A C A G T C A C T G T G C A C T A G A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C