Information for 4-GYGTGWCYCYGAC (Motif 4)

A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
Reverse Opposite:
A T C G A C G T A G T C C T G A A C T G C T A G A C T G C G A T A G T C C G T A A T G C C T G A A T G C
p-value:1e-11
log p-value:-2.600e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 23.2bp
Average Position of motif in Background59.0 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GYGTGWCYCYGAC--
---TGACCTTGACCT
 A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GYGTGWCYCYGAC--
NNNNTGACCCGGCGCG
 A C G T A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GYGTGWCYCYGAC
TGCGTG--------
 A C G T A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GYGTGWCYCYGAC
---TGACCTTGAV
 A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GYGTGWCYCYGAC--
---TGACCTTGACCT
 A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GYGTGWCYCYGAC--
TGTCGTGACCCCTTAAT
 A C G T A C G T A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GYGTGWCYCYGAC
--NTGACCTTGA-
 A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GYGTGWCYCYGAC
GGGGGTGTGTCC-----
 A C G T A C G T A C G T A C G T A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GYGTGWCYCYGAC
NCGTGACN-----
 A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GYGTGWCYCYGAC
-NATGACCTTGA-
 A T C G A G C T A T C G A C G T A C T G C G T A A G T C A G T C A G T C A G C T A C T G C G T A A T G C
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T