Information for 9-GCCCTTCWCAGCG (Motif 13)

T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G
Reverse Opposite:
G T A C A T C G A G T C G A C T A T C G C G T A A C T G G T C A T G C A T A C G A T C G A C T G A T G C
p-value:1e-6
log p-value:-1.568e+01
Information Content per bp:1.815
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif99.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets55.2 +/- 27.5bp
Average Position of motif in Background47.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCCTTCWCAGCG----
TCNCTTTACAGCGNNNT
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCCTTCWCAGCG----
TCNNTTTACAGCGNNNT
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCCTTCWCAGCG----
TCNNTTTACAGCGNNNT
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTCWCAGCG
NNGCNCTGCGCGGC-
 A C G T A C G T T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GCCCTTCWCAGCG--
-----DCTCAGCAGG
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCCCTTCWCAGCG
--------CAGCC
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCCCTTCWCAGCG
--GCTTCC-----
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCCCTTCWCAGCG---
-CCGATTTAAGCGACC
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G A C G T A C G T A C G T
A C G T T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTTCWCAGCG
NNGCACCTTTCTCC---
 A C G T A C G T A C G T A C G T T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCCCTTCWCAGCG
--AAATCACTGC-
 T A C G A G T C A T G C A T G C A C G T A C G T A G T C C G A T A T G C C T G A C T A G A T G C C A T G
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T