Information for 5-GCGCGTTCCACGT (Motif 16)

C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T
Reverse Opposite:
T G C A T A G C C T A G A G C T A C T G A C T G C T G A T C G A T A G C A T C G T G A C A C T G A G T C
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.777
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.6 +/- 22.5bp
Average Position of motif in Background54.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGTTCCACGT---------
ACCGCCNTCCACGTGTANNGACA
 A C G T C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCGCGTTCCACGT
-----ATCCAC--
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCGCGTTCCACGT-
------GCCACGTG
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGTTCCACGT
NCANGCGCGCGCGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCGCGTTCCACGT----
-------CCACGTGGNN
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCGCGTTCCACGT-
------NCCACGTG
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

Creb3l2/MA0608.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCGCGTTCCACGT--
------GCCACGTGT
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCGCGTTCCACGT----
-------CCACGTGGNN
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCGCGTTCCACGT---
------KCCACGTGAC
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GCGCGTTCCACGT-
--------CACGTG
 C T A G G T A C A C T G A T G C A T C G A G C T A G C T A G T C G T A C T C G A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G