Information for 7-AAGGGCTGCTCTC (Motif 9)

C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
Reverse Opposite:
A T C G G T C A A C T G C T G A A C T G A G T C G T C A A C T G A G T C A T G C G T A C A G C T G C A T
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.816
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif31.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.1 +/- 23.9bp
Average Position of motif in Background56.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTGCTCTC
TAATGGCGGNC---
 A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCTGCTCTC
CAAGATGGCGGC----
 A C G T A C G T A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCTGCTCTC
CAAGATGGCGGC----
 A C G T A C G T A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTGCTCTC--
NNNGGGGCGCCCCCNN
 A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTGCTCTC
TNNGGGCAG-----
 A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGCTGCTCTC
NNTNAGGGGCGGNNNN-
 A C G T A C G T A C G T A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:AAGGGCTGCTCTC
-------GCTCCG
 C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AAGGGCTGCTCTC---
------NSCACTYVAV
 C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AAGGGCTGCTCTC
------NGCTN--
 C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCTGCTCTC
AGGGGGCGGGGCTG
 A C G T C G T A C T G A A C T G A T C G A C T G G T A C A C G T A C T G G T A C A G C T A G T C A C G T A T G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G