Information for 6-CCTAGACGCAGAG (Motif 8)

A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G A T G C A T C G A C G T A G T C A C G T C G T A A C T G C T A G
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.928
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 10.5bp
Average Position of motif in Background33.1 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTAGACGCAGAG
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGACGCAGAG
TGTCTAGACG-----
 A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCTAGACGCAGAG-
----GAGSCCGAGC
 A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTAGACGCAGAG
-CCAGACRSVB--
 A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCTAGACGCAGAG
-CCAGACAG----
 A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CCTAGACGCAGAG
---AGAGGAAGTG
 A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CCTAGACGCAGAG
SCCTAGCAACAG--
 A C G T A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.47
Offset:-8
Orientation:forward strand
Alignment:--------CCTAGACGCAGAG
GATAACATCCTAGTAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--CCTAGACGCAGAG-----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGACGCAGAG
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A T G C A T C G A G T C C G T A A C T G T C G A A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T